BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or …

Running BEAST for the first time This tutorial will guide you through running BEAST and some of its accessory programs to do a simple phylogenetic analysis. If you haven’t already, download …

BEAST is a cross-platform program for Bayesian analysis of molecular sequences using MCMC. It is entirely orientated towards rooted, time-measured phylogenies inferred using strict or …

Downloading and installing BEAST on UNIX/Linux BEAST is a software package for phylogenetic analysis with an emphasis on time-scaled trees.

Installing BEAST BEAST has been developed in Java, which allows the same code to run on any platform that has the Java software installed. We have also created packages for each of the …

FigTree is a program for viewing trees, including summary information produced by TreeAnnotator, and producing publication quality figures.

To inform BEAUti/BEAST about the sampling dates of the sequences, go to the Tips menu and select the “Use tip dates” option. By default all the taxa are assumed to have a date of zero …

Glossary BEAST XML Reference XML BEAST XML Elements The following is a list of valid elements in a beast file. <adaptableSizeFastMatrixParameter>element Returns a …

Downloading and installing BEAST on Windows BEAST is a software package for phylogenetic analysis with an emphasis on time-scaled trees.

This tutorial provides a step-by-step explanation on how to reconstruct the evolutionary dynamics of influenza based on a set of virus sequences which have been isolated at different points in …